Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.92□□□□□ -0.34
Tubb1A2AQ07 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Gm10268-201ENSMUST00000085340 555 ntBASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Tubb1A2AQ07 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Pck2-205ENSMUST00000226352 2784 ntBASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Gm12390-201ENSMUST00000117897 397 ntBASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Gm24526-201ENSMUST00000082921 158 ntBASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Tubb1A2AQ07 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Tubb1A2AQ07 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms