Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Scn1aA2APX8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Scn1aA2APX8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.16□□□□□ -0.3
Scn1aA2APX8 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Gm2606-201ENSMUST00000100754 1002 ntBASIC13.16□□□□□ -0.3
Scn1aA2APX8 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.16□□□□□ -0.3
Scn1aA2APX8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC13.16□□□□□ -0.3
Scn1aA2APX8 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Gm7293-201ENSMUST00000216682 1007 ntBASIC13.16□□□□□ -0.3
Scn1aA2APX8 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.16□□□□□ -0.3
Scn1aA2APX8 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Scn1aA2APX8 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm28882-201ENSMUST00000185504 314 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm13097-201ENSMUST00000210722 397 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm8385-201ENSMUST00000058999 643 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm10312-201ENSMUST00000078515 489 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm7993-201ENSMUST00000200970 1384 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm5070-201ENSMUST00000177599 862 ntBASIC13.15□□□□□ -0.3
Scn1aA2APX8 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Scn1aA2APX8 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms