Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm14928-201ENSMUST00000120198 477 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm11637-201ENSMUST00000120601 592 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm16479-201ENSMUST00000121706 932 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm17208-201ENSMUST00000168388 535 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm45384-201ENSMUST00000210451 277 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm9908-201ENSMUST00000211534 448 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm17794-201ENSMUST00000220252 955 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 AC154239.3-201ENSMUST00000226933 674 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Gm26035-201ENSMUST00000083065 308 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc194A0A140LIT1 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gm8810-201ENSMUST00000172895 754 ntBASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc194A0A140LIT1 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms