Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC9.19□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm27194-201ENSMUST00000175753 2936 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Nudt18-202ENSMUST00000228554 3619 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm11637-201ENSMUST00000120601 592 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm7063-201ENSMUST00000186840 981 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm7561-201ENSMUST00000211203 886 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm19163-201ENSMUST00000223313 780 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Zscan30-202ENSMUST00000224144 1458 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 AC123834.1-201ENSMUST00000225346 2043 ntBASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm6210-201ENSMUST00000204734 1942 ntBASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Gm8602-201ENSMUST00000184045 607 ntBASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Trav9n-2A0A0G2JDP3 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms