Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Upk1bQ9Z2C6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Gm27838-201ENSMUST00000184829 128 ntBASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Gm35960-201ENSMUST00000202712 767 ntBASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 AC132317.1-201ENSMUST00000227227 962 ntBASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Upk1bQ9Z2C6 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk1bQ9Z2C6 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm5687-201ENSMUST00000118252 640 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm15487-201ENSMUST00000122373 465 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm6736-201ENSMUST00000166583 948 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm27702-201ENSMUST00000184512 56 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm42599-201ENSMUST00000201308 469 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk1bQ9Z2C6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Upk1bQ9Z2C6 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms