Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm18304-201ENSMUST00000189162 546 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm32999-201ENSMUST00000192693 562 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Gm10312-201ENSMUST00000078515 489 ntBASIC12.65□□□□□ -0.38
Scn8aQ9WTU3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.39
Scn8aQ9WTU3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn8aQ9WTU3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn8aQ9WTU3 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.65□□□□□ -0.39
Scn8aQ9WTU3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Scn8aQ9WTU3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm2260-201ENSMUST00000184965 657 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 CT573034.1-201ENSMUST00000222983 313 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 CT030182.1-201ENSMUST00000225935 533 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.64□□□□□ -0.39
Scn8aQ9WTU3 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Mir7070-201ENSMUST00000183657 86 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Scn8aQ9WTU3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms