Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm13722-201ENSMUST00000117964 3066 ntBASIC12.32□□□□□ -0.44
Cdh17Q9R100 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.32□□□□□ -0.44
Cdh17Q9R100 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm8652-201ENSMUST00000181363 964 ntBASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm27390-201ENSMUST00000184516 176 ntBASIC12.32□□□□□ -0.44
Cdh17Q9R100 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gm17794-201ENSMUST00000220252 955 ntBASIC12.32□□□□□ -0.44
Cdh17Q9R100 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Cdh17Q9R100 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.31□□□□□ -0.44
Cdh17Q9R100 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Gm11814-201ENSMUST00000119515 929 ntBASIC12.31□□□□□ -0.44
Cdh17Q9R100 Gm4271-201ENSMUST00000174444 973 ntBASIC12.31□□□□□ -0.44
Cdh17Q9R100 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.31□□□□□ -0.44
Cdh17Q9R100 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.31□□□□□ -0.44
Cdh17Q9R100 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Cdh17Q9R100 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm12138-201ENSMUST00000122180 951 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm27892-201ENSMUST00000185017 106 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm4768-201ENSMUST00000206199 686 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm29705-201ENSMUST00000212598 474 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gm19163-201ENSMUST00000223313 780 ntBASIC12.3□□□□□ -0.44
Cdh17Q9R100 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Cdh17Q9R100 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms