Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm8227-201ENSMUST00000223306 571 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Upk3aQ9JKX8 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm13297-201ENSMUST00000120205 934 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm44124-201ENSMUST00000204159 472 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm10608-202ENSMUST00000213924 676 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm39404-201ENSMUST00000216350 313 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Morn2-202ENSMUST00000227729 656 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm7399-201ENSMUST00000032395 858 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Gm24136-201ENSMUST00000083374 165 ntBASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Upk3aQ9JKX8 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3aQ9JKX8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3aQ9JKX8 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Upk3aQ9JKX8 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm23119-201ENSMUST00000158610 140 ntBASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm2546-201ENSMUST00000182630 991 ntBASIC12.14□□□□□ -0.47
Upk3aQ9JKX8 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms