Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trem1Q9JKE2 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gm11745-201ENSMUST00000121669 448 ntBASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Mir3113-201ENSMUST00000175478 76 ntBASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trem1Q9JKE2 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.29□□□□□ -0.6
Trem1Q9JKE2 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Mir698-201ENSMUST00000102164 109 ntBASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Gm18733-201ENSMUST00000173950 856 ntBASIC11.29□□□□□ -0.6
Trem1Q9JKE2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Htr1d-203ENSMUST00000121571 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Gm28693-201ENSMUST00000189622 2638 ntBASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trem1Q9JKE2 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms