Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Rab3c-202ENSMUST00000223922 2398 ntBASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm6184-201ENSMUST00000120403 1261 ntBASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm42670-201ENSMUST00000201816 1292 ntBASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm5364-201ENSMUST00000216789 889 ntBASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Thap2-203ENSMUST00000218989 527 ntBASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Mir497b-201ENSMUST00000093601 125 ntBASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Smco4Q9JIS3 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Clip1-204ENSMUST00000111564 5609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC10.08□□□□□ -0.8
Smco4Q9JIS3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Gm37714-201ENSMUST00000194742 342 ntBASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Zfp217-202ENSMUST00000109155 5670 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Smco4Q9JIS3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco4Q9JIS3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco4Q9JIS3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.07□□□□□ -0.8
Smco4Q9JIS3 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Smco4Q9JIS3 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Smco4Q9JIS3 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms