Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm26232-201ENSMUST00000083360 166 ntBASIC15.03■□□□□ -0
Ube3bQ9ES34 Gm24136-201ENSMUST00000083374 165 ntBASIC15.03■□□□□ -0
Ube3bQ9ES34 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.03■□□□□ -0
Ube3bQ9ES34 Gm26110-201ENSMUST00000083971 165 ntBASIC15.03■□□□□ -0
Ube3bQ9ES34 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ube3bQ9ES34 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.03■□□□□ -0
Ube3bQ9ES34 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ube3bQ9ES34 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ube3bQ9ES34 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.02■□□□□ -0
Ube3bQ9ES34 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC15.02■□□□□ -0
Ube3bQ9ES34 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Ube3bQ9ES34 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.02■□□□□ -0
Ube3bQ9ES34 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Gm23119-201ENSMUST00000158610 140 ntBASIC15.02■□□□□ -0
Ube3bQ9ES34 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 AA914427-201ENSMUST00000193194 1166 ntBASIC15.02■□□□□ -0
Ube3bQ9ES34 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ube3bQ9ES34 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.02■□□□□ -0
Ube3bQ9ES34 Gm17872-201ENSMUST00000222550 532 ntBASIC15.02■□□□□ -0
Ube3bQ9ES34 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Ube3bQ9ES34 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ube3bQ9ES34 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ube3bQ9ES34 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gm15808-201ENSMUST00000119046 604 ntBASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 AC169036.1-201ENSMUST00000227994 296 ntBASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ube3bQ9ES34 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ube3bQ9ES34 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube3bQ9ES34 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC15□□□□□ -0.01
Ube3bQ9ES34 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube3bQ9ES34 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ube3bQ9ES34 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ube3bQ9ES34 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ube3bQ9ES34 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ube3bQ9ES34 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ube3bQ9ES34 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ube3bQ9ES34 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms