Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tubb3Q9ERD7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm16202-201ENSMUST00000117532 544 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm27514-201ENSMUST00000183692 110 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm44064-201ENSMUST00000204964 1087 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm45331-201ENSMUST00000209868 554 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Tubb3Q9ERD7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubb3Q9ERD7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.58□□□□□ -0.39
Tubb3Q9ERD7 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Tubb3Q9ERD7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Tubb3Q9ERD7 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm27682-201ENSMUST00000183930 110 ntBASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm37497-201ENSMUST00000195830 798 ntBASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Rubie-203ENSMUST00000227803 2430 ntBASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Tubb3Q9ERD7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Gm5187-201ENSMUST00000117317 991 ntBASIC12.57□□□□□ -0.4
Tubb3Q9ERD7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms