Protein–RNA interactions for Protein: Q9D968

Hcfc2, Host cell factor 2, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc2Q9D968 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
Hcfc2Q9D968 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gm37014-201ENSMUST00000194723 2253 ntBASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gm38294-201ENSMUST00000192831 381 ntBASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 AC238811.1-201ENSMUST00000225302 441 ntBASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC9.61□□□□□ -0.87
Hcfc2Q9D968 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Map1b-203ENSMUST00000223725 2669 ntBASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm6211-201ENSMUST00000147973 4275 ntBASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm11524-201ENSMUST00000119349 807 ntBASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm43094-201ENSMUST00000196549 921 ntBASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm42550-201ENSMUST00000201553 960 ntBASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Gm7775-201ENSMUST00000218871 853 ntBASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Hcfc2Q9D968 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms