Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trim42Q9D2H5 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Gm27321-201ENSMUST00000185021 205 ntBASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim42Q9D2H5 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim42Q9D2H5 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm7336-201ENSMUST00000107041 1232 ntBASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm27680-201ENSMUST00000184192 160 ntBASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Daam2-202ENSMUST00000224595 1926 ntBASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim42Q9D2H5 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms