Protein–RNA interactions for Protein: Q9D1H0

Rita1, RBPJ-interacting and tubulin-associated protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rita1Q9D1H0 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Rita1Q9D1H0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm14381-201ENSMUST00000122105 414 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Rmrp-201ENSMUST00000157463 271 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm26956-201ENSMUST00000182176 986 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm38319-201ENSMUST00000194537 1266 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Gm16958-201ENSMUST00000180603 1765 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rita1Q9D1H0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm24231-201ENSMUST00000104315 133 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm14726-201ENSMUST00000120623 896 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm24845-201ENSMUST00000158034 109 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm9022-201ENSMUST00000182482 992 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm31256-201ENSMUST00000194705 506 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm8712-201ENSMUST00000221090 701 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm9257-201ENSMUST00000221254 232 ntBASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rita1Q9D1H0 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.6□□□□□ -0.55
Rita1Q9D1H0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rita1Q9D1H0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rita1Q9D1H0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.6□□□□□ -0.55
Rita1Q9D1H0 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms