Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk1aQ9D132 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Upk1aQ9D132 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.96□□□□□ -0.49
Upk1aQ9D132 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm14921-201ENSMUST00000118643 908 ntBASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm15703-201ENSMUST00000120250 880 ntBASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.96□□□□□ -0.49
Upk1aQ9D132 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Upk1aQ9D132 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.96□□□□□ -0.5
Upk1aQ9D132 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Upk1aQ9D132 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.95□□□□□ -0.5
Upk1aQ9D132 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.95□□□□□ -0.5
Upk1aQ9D132 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.95□□□□□ -0.5
Upk1aQ9D132 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Upk1aQ9D132 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.95□□□□□ -0.5
Upk1aQ9D132 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.95□□□□□ -0.5
Upk1aQ9D132 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Upk1aQ9D132 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms