Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm6266-201ENSMUST00000203844 806 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.11□□□□□ -0.47
Shmt2Q9CZN7 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Gm13829-201ENSMUST00000119600 138 ntBASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Shmt2Q9CZN7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Gm44124-201ENSMUST00000204159 472 ntBASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Gm29705-201ENSMUST00000212598 474 ntBASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.09□□□□□ -0.47
Shmt2Q9CZN7 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms