Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trim13Q9CYB0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Mir8102-201ENSMUST00000184148 139 ntBASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.71□□□□□ -0.53
Trim13Q9CYB0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trim13Q9CYB0 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm27177-202ENSMUST00000183514 2703 ntBASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm12151-201ENSMUST00000121374 290 ntBASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Mir7684-201ENSMUST00000183858 60 ntBASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Gm8617-201ENSMUST00000118796 2222 ntBASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.7□□□□□ -0.54
Trim13Q9CYB0 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.69□□□□□ -0.54
Trim13Q9CYB0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms