Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim11Q99PQ2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gm4735-201ENSMUST00000138679 1302 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gm5855-201ENSMUST00000200240 1305 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gm12363-201ENSMUST00000122250 668 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gm9630-201ENSMUST00000178304 885 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gm29649-201ENSMUST00000185649 419 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gm32025-201ENSMUST00000217960 307 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Arhgef33-209ENSMUST00000225223 714 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim11Q99PQ2 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm13394-201ENSMUST00000121658 1000 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm44124-201ENSMUST00000204159 472 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm45484-201ENSMUST00000210310 1141 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm7653-201ENSMUST00000214567 508 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 AC165260.3-202ENSMUST00000224550 1031 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Gm37472-201ENSMUST00000192342 4052 ntBASIC14.41□□□□□ -0.1
Trim11Q99PQ2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gm16296-201ENSMUST00000159905 325 ntBASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gm7029-201ENSMUST00000173226 450 ntBASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trim11Q99PQ2 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms