Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Trim16Q99PP9 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim16Q99PP9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim16Q99PP9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim16Q99PP9 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Trim16Q99PP9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Trim16Q99PP9 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.39□□□□□ -0.43
Trim16Q99PP9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm12390-201ENSMUST00000117897 397 ntBASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.39□□□□□ -0.43
Trim16Q99PP9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm18187-201ENSMUST00000196476 984 ntBASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.39□□□□□ -0.43
Trim16Q99PP9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trim16Q99PP9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm4984-201ENSMUST00000115987 360 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm27331-201ENSMUST00000183705 60 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm37922-201ENSMUST00000195596 455 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.38□□□□□ -0.43
Trim16Q99PP9 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trim16Q99PP9 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms