Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.63□□□□□ -0.39
Trim33Q99PP7 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Gm9396-201ENSMUST00000076703 567 ntBASIC12.63□□□□□ -0.39
Trim33Q99PP7 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Trim33Q99PP7 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trim33Q99PP7 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.62□□□□□ -0.39
Trim33Q99PP7 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm14660-201ENSMUST00000119809 575 ntBASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm45784-201ENSMUST00000188360 142 ntBASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm37042-201ENSMUST00000193816 581 ntBASIC12.62□□□□□ -0.39
Trim33Q99PP7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.62□□□□□ -0.39
Trim33Q99PP7 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trim33Q99PP7 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Gm1335-201ENSMUST00000121653 386 ntBASIC12.61□□□□□ -0.39
Trim33Q99PP7 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trim33Q99PP7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms