Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gm32999-201ENSMUST00000192693 562 ntBASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.13□□□□□ -0.31
Col25a1Q99MQ5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Gm2517-201ENSMUST00000215651 348 ntBASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Col25a1Q99MQ5 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Gm11783-201ENSMUST00000119549 885 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Gm11979-201ENSMUST00000119629 743 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Gm7904-201ENSMUST00000217049 465 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col25a1Q99MQ5 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms