Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.6□□□□□ -0.23
Tlr3Q99MB1 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.6□□□□□ -0.23
Tlr3Q99MB1 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Gm27516-201ENSMUST00000184237 98 ntBASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Tlr3Q99MB1 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.58□□□□□ -0.23
Tlr3Q99MB1 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tlr3Q99MB1 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Tlr3Q99MB1 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Tlr3Q99MB1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm13350-201ENSMUST00000120519 479 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm25927-201ENSMUST00000175058 117 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Snora73a-201ENSMUST00000082453 205 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm26035-201ENSMUST00000083065 308 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Tlr3Q99MB1 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms