Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Chmp1b1Q99LU0 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm12203-201ENSMUST00000118235 598 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm12209-201ENSMUST00000120089 596 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm26185-201ENSMUST00000157692 266 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm8652-201ENSMUST00000181363 964 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm27847-201ENSMUST00000183711 107 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm27375-201ENSMUST00000183799 107 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm28693-202ENSMUST00000190758 331 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm18062-201ENSMUST00000208020 547 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gm18055-201ENSMUST00000208254 547 ntBASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Chmp1b1Q99LU0 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm8805-201ENSMUST00000117848 313 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm13829-201ENSMUST00000119600 138 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm11978-201ENSMUST00000122315 466 ntBASIC11.97□□□□□ -0.49
Chmp1b1Q99LU0 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms