Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm9124-201ENSMUST00000191789 1092 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm9113-201ENSMUST00000192510 1018 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm9131-201ENSMUST00000193557 1089 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm9121-201ENSMUST00000193749 1071 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm37922-201ENSMUST00000195596 455 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm7287-201ENSMUST00000205267 602 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Cdk7-205ENSMUST00000225990 1159 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Pck2-205ENSMUST00000226352 2784 ntBASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cdk5rap3Q99LM2 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Auts2-212ENSMUST00000178555 309 ntBASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Gm8099-201ENSMUST00000200510 742 ntBASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdk5rap3Q99LM2 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm16479-201ENSMUST00000121706 932 ntBASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm23363-201ENSMUST00000175024 79 ntBASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm22121-201ENSMUST00000175148 54 ntBASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm19184-201ENSMUST00000196798 928 ntBASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Gm40377-201ENSMUST00000204604 2015 ntBASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdk5rap3Q99LM2 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms