Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm24934-201ENSMUST00000103764 111 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm24891-201ENSMUST00000104391 136 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm19287-201ENSMUST00000203190 358 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm807-202ENSMUST00000224929 408 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 CT030637.1-201ENSMUST00000228016 669 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 Gm26448-201ENSMUST00000082446 203 ntBASIC15.55■□□□□ 0.08
RtcbQ99LF4 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
RtcbQ99LF4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm23085-201ENSMUST00000157849 293 ntBASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm5455-201ENSMUST00000058710 715 ntBASIC15.54■□□□□ 0.08
RtcbQ99LF4 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm9129-201ENSMUST00000218173 1689 ntBASIC15.54■□□□□ 0.08
RtcbQ99LF4 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RtcbQ99LF4 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.54■□□□□ 0.08
RtcbQ99LF4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Gm13394-201ENSMUST00000121658 1000 ntBASIC15.53■□□□□ 0.08
RtcbQ99LF4 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Gm3332-201ENSMUST00000189337 928 ntBASIC15.53■□□□□ 0.08
RtcbQ99LF4 Gm43184-201ENSMUST00000197247 542 ntBASIC15.53■□□□□ 0.08
RtcbQ99LF4 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC15.53■□□□□ 0.08
RtcbQ99LF4 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 CT025551.1-201ENSMUST00000223996 692 ntBASIC15.53■□□□□ 0.08
RtcbQ99LF4 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RtcbQ99LF4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RtcbQ99LF4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RtcbQ99LF4 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms