Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Gm24255-201ENSMUST00000104481 128 ntBASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Gm11222-201ENSMUST00000119005 738 ntBASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Gm37259-201ENSMUST00000193903 849 ntBASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Lysmd3Q99LE3 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.15□□□□□ -0.31
Lysmd3Q99LE3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd3Q99LE3 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd3Q99LE3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd3Q99LE3 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lysmd3Q99LE3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm13736-201ENSMUST00000119272 253 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm14381-201ENSMUST00000122105 414 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm8018-201ENSMUST00000173536 789 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm30285-201ENSMUST00000214614 422 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lysmd3Q99LE3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm43823-201ENSMUST00000197391 1808 ntBASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm11531-201ENSMUST00000117614 555 ntBASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Gm26956-201ENSMUST00000182176 986 ntBASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lysmd3Q99LE3 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 287.9 ms