Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Pcdhac1Q91Y10 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Mir686-201ENSMUST00000102174 109 ntBASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 CT025678.1-201ENSMUST00000214795 2972 ntBASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Pcdhac1Q91Y10 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm45266-201ENSMUST00000210111 2173 ntBASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm11814-201ENSMUST00000119515 929 ntBASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Pcdhac1Q91Y10 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Pcdhac1Q91Y10 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.51
Pcdhac1Q91Y10 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gm5745-201ENSMUST00000183748 313 ntBASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gm27486-201ENSMUST00000184923 80 ntBASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gm44064-201ENSMUST00000204964 1087 ntBASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Pcdhac1Q91Y10 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms