Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.83□□□□□ -0.36
Pcdhb3Q91XZ7 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Gm24380-201ENSMUST00000122696 324 ntBASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Gm37857-201ENSMUST00000191784 1199 ntBASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Ccl2-201ENSMUST00000000193 813 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Gm9797-201ENSMUST00000052902 613 ntBASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pcdhb3Q91XZ7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm12490-201ENSMUST00000120255 560 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm28760-201ENSMUST00000185995 736 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm8515-201ENSMUST00000194852 576 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm7439-201ENSMUST00000214053 835 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Mir497b-201ENSMUST00000093601 125 ntBASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pcdhb3Q91XZ7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms