Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdhb6Q91XZ4 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm23931-201ENSMUST00000103842 109 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm15824-201ENSMUST00000119516 955 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm16379-201ENSMUST00000161469 348 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm8738-201ENSMUST00000172606 329 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm27514-201ENSMUST00000183692 110 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm8762-201ENSMUST00000193486 339 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm45930-201ENSMUST00000221330 292 ntBASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb6Q91XZ4 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Mir1982-201ENSMUST00000157368 74 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Rmrp-201ENSMUST00000157463 271 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm24548-201ENSMUST00000158650 108 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 AL732506.1-201ENSMUST00000226420 281 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb6Q91XZ4 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb6Q91XZ4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms