Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ddx41Q91VN6 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx41Q91VN6 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ddx41Q91VN6 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Gm22323-201ENSMUST00000103832 109 ntBASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Gm6621-201ENSMUST00000193251 772 ntBASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Gm32025-201ENSMUST00000217960 307 ntBASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Gm5781-201ENSMUST00000219792 443 ntBASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ddx41Q91VN6 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gm2991-201ENSMUST00000173338 480 ntBASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gm37489-201ENSMUST00000191883 159 ntBASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gm37259-201ENSMUST00000193903 849 ntBASIC14.54□□□□□ -0.08
Ddx41Q91VN6 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ddx41Q91VN6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Snord83b-201ENSMUST00000104546 94 ntBASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gm4986-201ENSMUST00000119731 549 ntBASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ddx41Q91VN6 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms