Protein–RNA interactions for Protein: Q8VIJ6

Sfpq, Splicing factor, proline- and glutamine-rich, mousemouse

Known RBP Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfpqQ8VIJ6 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Gm18473-201ENSMUST00000220543 868 ntBASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SfpqQ8VIJ6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SfpqQ8VIJ6 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SfpqQ8VIJ6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
SfpqQ8VIJ6 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.33□□□□□ -0.27
SfpqQ8VIJ6 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SfpqQ8VIJ6 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SfpqQ8VIJ6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SfpqQ8VIJ6 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm43075-201ENSMUST00000198613 3905 ntBASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SfpqQ8VIJ6 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms