Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Slc6a20aQ8VDB9 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Gm16177-201ENSMUST00000120728 718 ntBASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Gm29127-201ENSMUST00000188304 517 ntBASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Slc6a20aQ8VDB9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm26927-201ENSMUST00000182385 965 ntBASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm27682-201ENSMUST00000183930 110 ntBASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Slc6a20aQ8VDB9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Slc6a20aQ8VDB9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms