Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clrn1Q8K445 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.94□□□□□ -0.5
Clrn1Q8K445 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clrn1Q8K445 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC11.93□□□□□ -0.5
Clrn1Q8K445 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm25927-201ENSMUST00000175058 117 ntBASIC11.93□□□□□ -0.5
Clrn1Q8K445 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.93□□□□□ -0.5
Clrn1Q8K445 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm25857-201ENSMUST00000082788 129 ntBASIC11.93□□□□□ -0.5
Clrn1Q8K445 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.93□□□□□ -0.5
Clrn1Q8K445 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Clrn1Q8K445 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Clrn1Q8K445 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms