Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.27□□□□□ -0.13
Syne4Q8CII8 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Syne4Q8CII8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm7851-201ENSMUST00000117574 323 ntBASIC14.26□□□□□ -0.13
Syne4Q8CII8 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC14.26□□□□□ -0.13
Syne4Q8CII8 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm9540-201ENSMUST00000188230 478 ntBASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm19994-201ENSMUST00000217086 586 ntBASIC14.26□□□□□ -0.13
Syne4Q8CII8 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Syne4Q8CII8 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm12196-201ENSMUST00000120954 262 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm14460-201ENSMUST00000121511 639 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm5778-201ENSMUST00000171003 1072 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 CT009713.8-201ENSMUST00000225448 560 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm5847-201ENSMUST00000178959 1595 ntBASIC14.25□□□□□ -0.13
Syne4Q8CII8 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Syne4Q8CII8 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Syne4Q8CII8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms