Protein–RNA interactions for Protein: Q8CE13

Ccdc17, Coiled-coil domain-containing protein 17, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc17Q8CE13 Gm5846-201ENSMUST00000193146 1414 ntBASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Ccdc17Q8CE13 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm14208-201ENSMUST00000119645 678 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm11978-201ENSMUST00000122315 466 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Paupar-201ENSMUST00000194826 3482 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ccdc17Q8CE13 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm13875-201ENSMUST00000120162 282 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm5597-201ENSMUST00000182353 1193 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm27023-201ENSMUST00000182372 285 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm28450-201ENSMUST00000187349 638 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 AA914427-201ENSMUST00000193194 1166 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ccdc17Q8CE13 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms