Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Gm19184-201ENSMUST00000196798 928 ntBASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.44□□□□□ -0.26
Ccdc87Q8CDL9 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm9061-201ENSMUST00000182707 1006 ntBASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm27839-201ENSMUST00000184242 106 ntBASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm38671-201ENSMUST00000200573 130 ntBASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm7287-201ENSMUST00000205267 602 ntBASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gm26035-201ENSMUST00000083065 308 ntBASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc87Q8CDL9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gm4984-201ENSMUST00000115987 360 ntBASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gm27486-201ENSMUST00000184923 80 ntBASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc87Q8CDL9 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms