Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.27□□□□□ -0.44
SynpoQ8CC35 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
SynpoQ8CC35 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Gm38266-201ENSMUST00000194931 421 ntBASIC12.27□□□□□ -0.45
SynpoQ8CC35 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.27□□□□□ -0.45
SynpoQ8CC35 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
SynpoQ8CC35 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm43061-201ENSMUST00000198850 2241 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Il33-202ENSMUST00000120388 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm6447-201ENSMUST00000118905 835 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Snora73a-201ENSMUST00000082453 205 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.26□□□□□ -0.45
SynpoQ8CC35 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
SynpoQ8CC35 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
SynpoQ8CC35 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms