Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm9083-201ENSMUST00000120423 819 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm13350-201ENSMUST00000120519 479 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm31256-201ENSMUST00000194705 506 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm44958-201ENSMUST00000203734 736 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Alx1Q8C8B0 Gm45342-201ENSMUST00000210903 1363 ntBASIC14.73□□□□□ -0.05
Alx1Q8C8B0 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm11930-201ENSMUST00000117788 190 ntBASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Mir6420-201ENSMUST00000185032 102 ntBASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Alx1Q8C8B0 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm5780-201ENSMUST00000217774 1834 ntBASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm15547-201ENSMUST00000122152 333 ntBASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Alx1Q8C8B0 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms