Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC13.32□□□□□ -0.28
Uba3Q8C878 Gm24548-201ENSMUST00000158650 108 ntBASIC13.32□□□□□ -0.28
Uba3Q8C878 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.32□□□□□ -0.28
Uba3Q8C878 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC13.32□□□□□ -0.28
Uba3Q8C878 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.32□□□□□ -0.28
Uba3Q8C878 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Uba3Q8C878 AC108416.1-202ENSMUST00000228927 1201 ntBASIC13.32□□□□□ -0.28
Uba3Q8C878 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Gm6203-201ENSMUST00000209575 1342 ntBASIC13.32□□□□□ -0.28
Uba3Q8C878 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Uba3Q8C878 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC13.32□□□□□ -0.28
Uba3Q8C878 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Uba3Q8C878 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.32□□□□□ -0.28
Uba3Q8C878 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm13316-201ENSMUST00000140537 691 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm43118-201ENSMUST00000199149 775 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm10608-202ENSMUST00000213924 676 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.31□□□□□ -0.28
Uba3Q8C878 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.31□□□□□ -0.28
Uba3Q8C878 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Uba3Q8C878 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Gm11793-201ENSMUST00000120433 981 ntBASIC13.3□□□□□ -0.28
Uba3Q8C878 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Gm9899-201ENSMUST00000065519 555 ntBASIC13.3□□□□□ -0.28
Uba3Q8C878 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Uba3Q8C878 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms