Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ccdc60Q8C4J0 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm10305-201ENSMUST00000195331 2475 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Mir1247-201ENSMUST00000116706 82 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm8018-201ENSMUST00000173536 789 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm44405-201ENSMUST00000198952 126 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm6013-201ENSMUST00000212264 699 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm26035-201ENSMUST00000083065 308 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ccdc60Q8C4J0 Gm45266-201ENSMUST00000210111 2173 ntBASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gm5940-201ENSMUST00000117582 1068 ntBASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gm42627-201ENSMUST00000197347 224 ntBASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gm7399-201ENSMUST00000032395 858 ntBASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gm9899-201ENSMUST00000065519 555 ntBASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Retreg1-206ENSMUST00000228306 1430 ntBASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ccdc60Q8C4J0 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm13736-201ENSMUST00000119272 253 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm11597-201ENSMUST00000121423 964 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm13786-201ENSMUST00000122371 333 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Olfr284-202ENSMUST00000206647 966 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm10608-202ENSMUST00000213924 676 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm45925-201ENSMUST00000218882 744 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm45930-201ENSMUST00000221330 292 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gm8399-201ENSMUST00000082300 1117 ntBASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ccdc60Q8C4J0 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms