Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cps1Q8C196 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC16.68■□□□□ 0.26
Cps1Q8C196 Gm11836-201ENSMUST00000121022 441 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Gm8737-201ENSMUST00000122208 642 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cps1Q8C196 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Cps1Q8C196 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Gm3551-201ENSMUST00000190750 664 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cps1Q8C196 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Gm13384-201ENSMUST00000117166 1344 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Gm18198-201ENSMUST00000204986 1551 ntBASIC16.68■□□□□ 0.26
Cps1Q8C196 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cps1Q8C196 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Gm18367-201ENSMUST00000176139 600 ntBASIC16.67■□□□□ 0.26
Cps1Q8C196 Gm6771-201ENSMUST00000182716 1001 ntBASIC16.67■□□□□ 0.26
Cps1Q8C196 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC16.67■□□□□ 0.26
Cps1Q8C196 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cps1Q8C196 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Cps1Q8C196 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Cps1Q8C196 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC16.67■□□□□ 0.26
Cps1Q8C196 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC16.67■□□□□ 0.26
Cps1Q8C196 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Gm7114-201ENSMUST00000190159 1789 ntBASIC16.67■□□□□ 0.26
Cps1Q8C196 Gm43807-201ENSMUST00000200678 1781 ntBASIC16.67■□□□□ 0.26
Cps1Q8C196 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cps1Q8C196 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Rn7s6-201ENSMUST00000175005 291 ntBASIC16.66■□□□□ 0.26
Cps1Q8C196 Gm38151-201ENSMUST00000195085 289 ntBASIC16.66■□□□□ 0.26
Cps1Q8C196 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cps1Q8C196 AC174797.2-202ENSMUST00000225729 568 ntBASIC16.66■□□□□ 0.26
Cps1Q8C196 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.66■□□□□ 0.26
Cps1Q8C196 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Gm12248-202ENSMUST00000218429 1462 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Cps1Q8C196 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cps1Q8C196 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm15207-201ENSMUST00000119259 442 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm4654-201ENSMUST00000183305 982 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC16.65■□□□□ 0.26
Cps1Q8C196 AC165260.2-203ENSMUST00000224237 336 ntBASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Cps1Q8C196 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cps1Q8C196 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms