Protein–RNA interactions for Protein: Q8BUP8

Fam43a, Protein FAM43A, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam43aQ8BUP8 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm15823-201ENSMUST00000064305 670 ntBASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Fam43aQ8BUP8 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fam43aQ8BUP8 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Fam43aQ8BUP8 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Fam43aQ8BUP8 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Fam43aQ8BUP8 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gm12138-201ENSMUST00000122180 951 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gm6745-201ENSMUST00000199216 526 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gm44719-201ENSMUST00000206404 149 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gm18307-201ENSMUST00000206864 949 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 CT010480.4-201ENSMUST00000224654 2283 ntBASIC14.2□□□□□ -0.14
Fam43aQ8BUP8 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Gm9908-201ENSMUST00000211534 448 ntBASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Gm5161-201ENSMUST00000075243 853 ntBASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Fam43aQ8BUP8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fam43aQ8BUP8 AC121870.2-201ENSMUST00000214343 1870 ntBASIC14.18□□□□□ -0.14
Fam43aQ8BUP8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Fam43aQ8BUP8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Fam43aQ8BUP8 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam43aQ8BUP8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Fam43aQ8BUP8 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms