Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm8738-201ENSMUST00000172606 329 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm27514-201ENSMUST00000183692 110 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 AC140451.2-201ENSMUST00000228030 664 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.81□□□□□ -0.36
Usp43Q8BUM9 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Usp43Q8BUM9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 AC108416.1-202ENSMUST00000228927 1201 ntBASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Usp43Q8BUM9 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Rmrp-201ENSMUST00000157463 271 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Snora78-201ENSMUST00000158630 128 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm44124-201ENSMUST00000204159 472 ntBASIC12.79□□□□□ -0.36
Usp43Q8BUM9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms