Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm24231-201ENSMUST00000104315 133 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm11531-201ENSMUST00000117614 555 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm11222-201ENSMUST00000119005 738 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm43822-201ENSMUST00000200285 476 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Gm21769-201ENSMUST00000211922 111 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nup54Q8BTS4 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Gm37201-201ENSMUST00000191845 523 ntBASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Gm43758-201ENSMUST00000199500 367 ntBASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Gm26035-201ENSMUST00000083065 308 ntBASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nup54Q8BTS4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm12314-201ENSMUST00000118104 538 ntBASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm14760-201ENSMUST00000121831 999 ntBASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC12.93□□□□□ -0.34
Nup54Q8BTS4 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms