Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC13.43□□□□□ -0.26
Rd3Q8BRE0 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm22902-201ENSMUST00000158488 302 ntBASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm16296-201ENSMUST00000159905 325 ntBASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Rd3Q8BRE0 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Rd3Q8BRE0 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.4□□□□□ -0.26
Rd3Q8BRE0 Gm7857-201ENSMUST00000117957 358 ntBASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms