Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gm8000-201ENSMUST00000188378 592 ntBASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gm17795-201ENSMUST00000214505 757 ntBASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Smco3Q8BQM7 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Gm15240-201ENSMUST00000118156 720 ntBASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smco3Q8BQM7 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm42840-201ENSMUST00000200303 2251 ntBASIC10.4□□□□□ -0.74
Smco3Q8BQM7 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm12485-201ENSMUST00000119641 291 ntBASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC10.4□□□□□ -0.74
Smco3Q8BQM7 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms