Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Sfr1Q8BP27 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gm5187-201ENSMUST00000117317 991 ntBASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Sfr1Q8BP27 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Snord83b-201ENSMUST00000104546 94 ntBASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Sfr1Q8BP27 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms