Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Col16a1Q8BLX7 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gm38058-201ENSMUST00000194323 4368 ntBASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 AC154671.1-201ENSMUST00000228617 1578 ntBASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gm22711-201ENSMUST00000116890 133 ntBASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gm11949-201ENSMUST00000117640 372 ntBASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gm28324-201ENSMUST00000187913 264 ntBASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Col16a1Q8BLX7 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Col16a1Q8BLX7 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm18159-201ENSMUST00000174516 1070 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm23045-201ENSMUST00000175041 96 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm21092-201ENSMUST00000178995 955 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm27910-201ENSMUST00000185004 107 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm44882-201ENSMUST00000205702 802 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm17931-201ENSMUST00000208132 634 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Prrxl1-205ENSMUST00000228878 723 ntBASIC16.26■□□□□ 0.19
Col16a1Q8BLX7 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm10152-201ENSMUST00000193475 1344 ntBASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm8731-201ENSMUST00000118088 412 ntBASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Gm13937-201ENSMUST00000121000 988 ntBASIC16.25■□□□□ 0.19
Col16a1Q8BLX7 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms