Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Cdhr3Q8BL00 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm10576-201ENSMUST00000191927 825 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm8463-201ENSMUST00000208573 613 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm15823-201ENSMUST00000064305 670 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
Cdhr3Q8BL00 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
Cdhr3Q8BL00 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.02□□□□□ -0.65
Cdhr3Q8BL00 Gm14760-201ENSMUST00000121831 999 ntBASIC11.02□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms